Package: SPCompute 1.0.3

SPCompute: Compute Power or Sample Size for GWAS with Covariate Effect

Fast computation of the required sample size or the achieved power, for GWAS studies with different types of covariate effects and different types of covariate-gene dependency structure. For the detailed description of the methodology, see Zhang (2022) "Power and Sample Size Computation for Genetic Association Studies of Binary Traits: Accounting for Covariate Effects" <arxiv:2203.15641>.

Authors:Ziang Zhang, Lei Sun

SPCompute_1.0.3.tar.gz
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SPCompute.pdf |SPCompute.html
SPCompute/json (API)
NEWS

# Install 'SPCompute' in R:
install.packages('SPCompute', repos = c('https://aguerozz.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/aguerozz/spcompute/issues

On CRAN:

3.81 score 13 scripts 182 downloads 6 exports 2 dependencies

Last updated 2 years agofrom:25648f47a3. Checks:OK: 6 NOTE: 1. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 01 2024
R-4.5-winOKNov 01 2024
R-4.5-linuxOKNov 01 2024
R-4.4-winNOTENov 01 2024
R-4.4-macOKNov 01 2024
R-4.3-winOKNov 01 2024
R-4.3-macOKNov 01 2024

Exports:check_parametersCompute_PowerCompute_Power_multiCompute_SizeCompute_Size_multiconvert_preva_to_intercept

Dependencies:latticeMatrix

SPCompute

Rendered fromSPCompute-vignette.Rmdusingknitr::rmarkdownon Nov 01 2024.

Last update: 2023-01-24
Started: 2022-02-28